[develop] Configs for compiling and running online-cmaq on cheyenne.#783
Conversation
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As a heads up for the repository managers, please open an issue first before starting any work. |
@GeorgeGayno-NOAA Apologies. I'm new to this, and have been working to get SRW online-cmaq running on Cheyenne. I didn't realize I'd be contributing to three different repos. Thanks for the guidance. |
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I'll need some assistance interpreting the failed check. It seems 100% of tests were successful, but the check failed anyway:
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I don't know why it failed. I don't think it is anything you did. Let me rerun it. These tests break a lot. We are trying to make them more robust. |
It looks like gcovr was updated yesterday: https://gcovr.com/en/stable/changelog.html#march-2023 And my workflows are breaking in the same way. So this won't hold up approval of your PRs. |
Thanks, George! |
No problem. See our wiki page for more details: https://github.com/ufs-community/UFS_UTILS/wiki/3.-Checking-out-code-and-making-changes |
GeorgeGayno-NOAA
requested review from
GeorgeGayno-NOAA,
JeffBeck-NOAA and
LarissaReames
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I don't have access to Cheyenne and we don't officially support that machine. So, I trust that your changes are working. @JeffBeck-NOAA and @LarissaReames-NOAA do you work on Cheyenne? |
@GeorgeGayno-NOAA Yes, we have several people here at RAL/NCAR using these configs on Cheyenne for online-cmaq. Trying to streamline our setup by contributing these configs. |
* origin/develop: Update ccpp submodule (ufs-community#827) Change length of character variable "mosaic_name" in "make_solo_mosaic.c" (ufs-community#824) Update GDAS INIT utility for GFS COM reorganization (ufs-community#820) Add backup calculation for orography and mask generation (ufs-community#713) Improve repository build script (ufs-community#819) Use latest wgrib2 executable on Jet. (ufs-community#816) chgres_cube - Minor update for high-resolution grids . (ufs-community#814) Update PR template (ufs-community#813) global_cycle - Add soil moisture nudging for NoahMP option (ufs-community#809) Release v1.10.0 (ufs-community#807) Run sfc_climo_gen utility on Hera (ufs-community#791) Fix bug in chgres_cube subroutine search_many (ufs-community#808) sfc_climo_gen - Output fractions of each vegetation/soil type category (ufs-community#748) Replace w3nco library with w3emc (ufs-community#802) Fix Debug compilation (ufs-community#800) Update WCOSS2 build module to use new ESMF v8.4.1 library. (ufs-community#799) Update chgres_cube documentation for duplicate grib2 records (ufs-community#795) Use latest Cray modules on WCOSS2 (ufs-community#792) Remove checksum attribute from global_cycle restart files (ufs-community#794) Remove goto statements from chgres_cube (ufs-community#775) FVCOM_TOOLS - Remove dependency on module_nwp_base.f90 (ufs-community#790) Remove "gcovr" step from the 'developer' workflow (ufs-community#785) Update build module for Cheyenne (ufs-community#783) GDAS Init utility - consolidate the copy of coldstart files (ufs-community#773) Remove support for ODIN machine (ufs-community#782) Update GDAS INIT utility to optionally use fracoro data (ufs-community#741) Option to build only application specific utilities (e.g. GFS) (ufs-community#777) Use combined IP/IP2 library (ufs-community#695) Initial updates to global_cycle for Noah-MP land model (ufs-community#774) New resolution options for the cpld_gridgen utility (ufs-community#769) Use new EPIC-maintained hpc-stack on Jet (ufs-community#771) Update GDAS initialization scripts for the new ENKF directory (ufs-community#764) Reduce memory usage in chgres_cube (ufs-community#766) Detect duplicate vertical levels in chgres_cube. (ufs-community#767) Point to new input orography directory. (ufs-community#758) Release version 1.9 (ufs-community#754) HAFSv1 grid nesting updates (ufs-community#752) Remove compiler warnings from chgres_cube (ufs-community#747) chgres_cube: Split input_data module into to 3 separate modules (ufs-community#744) More work on CI, checking with different versions of ESMF (ufs-community#742) Add processing of soil color to sfc_climo_gen (ufs-community#721) more work on CI - added Linux_versions workflow (ufs-community#739) Add TEST_FILE_DIR option to CMake build, where test data files can be found instead of using FTP. (ufs-community#732) adding developer workflow (ufs-community#724) Update GDAS INIT utility for v16.3. (ufs-community#723) OROG_GSL - Remove negative bias in orographic asymmetery (OA) fields (ufs-community#718) Incorporate BNU soil type data (ufs-community#717) High-resolution MODIS and STATSGO veg/soil data. (ufs-community#703) Run WCOSS2 consistency tests under role account (ufs-community#711) Fix macOS CI workflow (ufs-community#715) Add utility codes to create BNU soil texture data (ufs-community#707) Update chgres_cube to output netcdf4 file. (ufs-community#704) Incorporate high-res global VIIRS vegetation data. (ufs-community#699) Run grid_gen consistency tests in parallel. (ufs-community#697) Fix error handling in "link_fixdirs.sh". Add -L to the copy command. (ufs-community#701) Update for new fixed data directory structure (ufs-community#688) Add WCOSS2 support for tests (ufs-community#693) Increase test data pull timeout (ufs-community#692) Option to install binaries to any directory. (ufs-community#685) Update global_cycle to use the latest CCPP version of sfcsub.F (ufs-community#671) Incorporate weight_gen program. (ufs-community#677) Add install of jpeg-turbo to macos workflows (ufs-community#684) Improve logic in regression test driver script (ufs-community#681) Release v1.8 (ufs-community#679) Update link_fixdirs.sh for new data directories (ufs-community#672) Update default ice climatology in ./ush/global_cycle.sh. (ufs-community#664) Remove all references to WCOSS 1 from UFS_UTILS (ufs-community#667) Update workflows to use latest macOS and ubuntu (ufs-community#675) Update GDAS Initialization utility for recent HPSS tarball name change (ufs-community#666) Port UFS_UTILS to WCOSS2 (ufs-community#642) Fix chgres_cube to process GEFS GRIB2 data (ufs-community#658) Update global_cycle_driver.sh for GFS OPS directory convention (ufs-community#655) Update documentation for SRW App (ufs-community#656) New coupled model utility (ufs-community#647) Update support for S4 and enable regression testing (ufs-community#654) global_cycle - Link to CCPP version of sfcsub.F (ufs-community#636) Add processing of new global AFWA snow data to emcsfc_snow2mdl. (ufs-community#648) Update build module on Cheyenne (ufs-community#646) Move to Intel 2022 on Jet, Hera and Orion (ufs-community#650) Host doxygen documentation for multiple releases (ufs-community#644) Download unit test data as part of the CMake build (ufs-community#630) chgres_cube - Complete removal of wgrib2 library (ufs-community#641) Eliminate circular dependency in chgres_cube Update workflow files to pull netcdf-c library from GitHub chgres_cube - Remove the wgrib2 library from the GRIB2 data read routines. Undefined symbols on macOS with Intel compiler (ufs-community#628) Update FVCOM code to handle sub-domain restart files using multiple cores. (ufs-community#624) chgres_cube - Run routine 'convert_omega' on all tasks. (ufs-community#627) Use ESMF 8.2.0 library Automate update of consistency test baseline data. (ufs-community#603) Update workflow files to use newer versions of ESMF and NCEPLIBS. (ufs-community#617) Update build modules to be lua compliant (ufs-community#614) Allow FVCOM tools to Update Ice Surface Roughness Length (ufs-community#604) Update the requested memory in the Orion chgres_cube consistency test script (ufs-community#611) Use copy of grib_util under Jet role account. (ufs-community#608) Run consistency tests on Orion using role account (ufs-community#606) Run consistency tests on Hera using role account (ufs-community#605) Run consistency tests on Jet using role account. (ufs-community#607) Update more documentation after move to ufs-community (ufs-community#597) fvcom_tools - Add option to process 'cold' or 'warm' restart files (ufs-community#595) Update documentation after move to ufs-community (ufs-community#594) chgres_cube - Eliminate segmentation fault in input_data.F90 (ufs-community#585) Update to language of unit test README to match that in unit test. chgres_cube - Simplify surface processing using field bundles (ufs-community#572) Add compiler flags for GNU Fortran v10 or newer compilers. (ufs-community#583) Move verbose output from example unit test to be commented to streamline test output. Updates to test README to add instructions for use of example unit test. Add Findwgrib2.cmake (ufs-community#578) Added unit test to be used as an instructional example for new users.
2 participants
DESCRIPTION OF CHANGES:
UFS_UTILS config modules for Cheyenne HPC. These were developed in order to compile/run online-cmaq on Cheyenne with the new workflow. Tested successfully on cheyenne intel.
TESTS CONDUCTED:
I have compiled and run a version of the community config on Cheyenne, but I have not run formal tests from the test harness. Let me know if you would like me to contribute the config.yaml I developed for this purpose.
DEPENDENCIES:
PR with cheyenne configs for the ufs_weather_model